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[ Källkod: khmer  ]

Paket: khmer (3.0.0~a3+dfsg-8build1)

in-memory DNA sequence kmer counting, filtering & graph traversal

khmer is a library and suite of command line tools for working with DNA sequence. It is primarily aimed at short-read sequencing data such as that produced by the Illumina platform. khmer takes a k-mer-centric approach to sequence analysis, hence the name.

Andra paket besläktade med khmer

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  • dep: khmer-common
    common files for the khmer project tools
  • dep: libbz2-1.0
    high-quality block-sorting file compressor library - runtime
  • dep: libc6 (>= 2.38)
    GNU C Library: Shared libraries
    också ett virtuellt paket som tillhandahålls av libc6-udeb
  • dep: libgcc-s1 (>= 3.4)
    GCC support library
  • dep: libgomp1 (>= 4.9)
    GCC OpenMP (GOMP) support library
  • dep: libstdc++6 (>= 13.1)
    GNU Standard C++ Library v3
  • dep: python3
    interactive high-level object-oriented language (default python3 version)
    dep: python3 (<< 3.13)
    dep: python3 (>= 3.12~)
  • dep: python3-screed
    short nucleotide read sequence utils in Python 3
  • dep: zlib1g (>= 1:1.2.3.4)
    compression library - runtime

Hämta khmer

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amd64 7.371,3 kbyte39443 kbyte [filförteckning]